Alteromonas sediminis strain U0105

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadaceae

Genus

Alteromonas

Description

Alteromonas sediminis strain U0105 is a marine bacterium notable for its motility, as indicated by the presence of flagella. This feature allows the organism to navigate its aquatic environment, potentially enhancing its ability to locate nutrients and adapt to various ecological niches within marine sediments. The strain possesses a single replicon, which simplifies its genetic organization. This characteristic can influence the bacterium's replication and overall genomic stability, contributing to its adaptability in the marine ecosystem. The accession number for Alteromonas sediminis strain U0105 is RPOK00000000.1, which provides a reference for researchers seeking to access its genomic data. Such information can be crucial for studies focused on microbial diversity, biogeochemical cycling, and the functional roles of marine bacteria. In summary, the motility provided by flagella and the streamlined genomic structure of Alteromonas sediminis strain U0105 suggest that this bacterium plays a significant role in marine sediment ecosystems, where its movement and genetic efficiency may contribute to nutrient cycling and interactions with other microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadaceae
GenusAlteromonas
SpeciesAlteromonas sediminis
Strainstrain U0105

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Alteromonas sediminis strain U0105
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alteromonas sediminis strain U0105 scaffold14, whole genome

Gene Summary

Adenine Count

1086228 bp

Thymine Count

1083013 bp

Guanine Count

901050 bp

Cytosine Count

893779 bp

Genome Length

3965066 bp

Protein-coding Genes

3562 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseDRW07_04990Not AvailablePositive1100626 - 110127022200.9
d-hexose-6-phosphate mutarotaseDRW07_04995Not AvailableNegative1101282 - 110212431314.7
type i glyceraldehyde-3-phosphate dehydrogenaseDRW07_05000Not AvailableNegative1102223 - 110321835076.8
4-alpha-glucanotransferaseDRW07_05005Not AvailablePositive1103446 - 110565081517.5
1,4-alpha-glucan branching protein glgbDRW07_05010Not AvailablePositive1105762 - 110793682152.9
glycogen debranching enzyme glgxDRW07_05015Not AvailablePositive1107940 - 111000678164.3
nadp-dependent phosphogluconate dehydrogenaseDRW07_05020Not AvailablePositive1110049 - 111159956657.5
peptide-methionine (r)-s-oxide reductaseDRW07_05025Not AvailablePositive1111621 - 111200114394.7
duf2989 domain-containing proteinDRW07_05030Not AvailableNegative1112045 - 111295634889.6
glyceraldehyde-3-phosphate dehydrogenaseDRW07_05035Not AvailablePositive1113078 - 111452353079.4

Displaying genes 991 – 1000 of 3615 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.