Escherichia coli strain PNUSAE019721

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain PNUSAE019721 is a Gram-negative, facultative anaerobic bacterium characterized by its rod shape and mobility, attributed to the presence of flagella. This strain is primarily host-associated, with an optimal growth temperature of 37°C, fitting within the mesophilic temperature range. It comprises a single replicon and is surrounded by a double membrane. The biotic relationships of strain PNUSAE019721 indicate it is free-living, yet it has a wide array of hosts, including Homo sapiens, various domesticated animals such as Gallus gallus (chickens) and Bos taurus (cattle), as well as plants like Solanum lycopersicum (tomatoes) and Brassica oleracea var. italica (broccoli). This diverse host range suggests that E. coli PNUSAE019721 could play different roles in various ecological contexts, from symbiotic relationships in the gut to potential pathogenic interactions. Clinically, this strain is implicated in numerous health issues, particularly in humans. It is associated with urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and several severe conditions such as bloody diarrhea and hemolytic uremic syndrome (HUS). The pathogenic effects can lead to serious complications, including renal failure and septicemia. The extensive health impacts of E. coli PNUSAE019721 highlight its significance in both clinical microbiology and public health, underscoring the need for monitoring and understanding its behavior in both human and animal hosts to mitigate its pathogenic potential.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain PNUSAE019721

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain PNUSAE019721
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain PNUSAE019721

Gene Summary

Adenine Count

1306421 bp

Thymine Count

1288537 bp

Guanine Count

1329606 bp

Cytosine Count

1345236 bp

Genome Length

5287180 bp

Protein-coding Genes

4824 genes

Non-Coding Genes

381 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinEEP23_16300Not AvailableNegative3408262 - 340868115682.6
Trna,type:arg,anti_codon:tct;Not AvailableNot AvailablePositive3408880 - 3408956Not Available
Hypothetical proteinEEP23_16310Not AvailablePositive3409384 - 34095907005.06
Putative head-tail connecting proteinEEP23_16315Not AvailablePositive3409605 - 341128462344.7
Hypothetical proteinEEP23_16320Not AvailablePositive3411281 - 341157711491.7
Hypothetical proteinEEP23_16325Not AvailablePositive3411580 - 341227525092.0
Major capsid proteinEEP23_16330Not AvailablePositive3412290 - 341327636106.8
Hypothetical proteinEEP23_16335Not AvailablePositive3413328 - 341376515149.8
Hypothetical proteinEEP23_16340Not AvailablePositive3413776 - 341411112438.7
Hypothetical proteinEEP23_16345Not AvailablePositive3414168 - 341477322183.1

Displaying genes 81 – 90 of 5210 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total