Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306421 bp
Thymine Count
1288537 bp
Guanine Count
1329606 bp
Cytosine Count
1345236 bp
Genome Length
5287180 bp
Protein-coding Genes
4824 genes
Non-Coding Genes
381 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf905 domain-containing protein | EEP23_25870 | Not Available | Positive | 5119911 - 5120047 | 5146.08 |
| serine protease autotransporter espi | EEP23_25875 | Not Available | Negative | 5120215 - 5122422 | 78092.7 |
| flagellar biosynthesis protein flhb | EEP23_25880 | Not Available | Negative | 5122423 - 5122884 | 17662.1 |
| esct/ysct/hrct family type iii secretion system export apparatus protein | EEP23_25885 | Not Available | Negative | 5122893 - 5123660 | 28269.0 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | EEP23_25890 | Not Available | Negative | 5123662 - 5123922 | 9430.85 |
| escr/yscr/hrcr family type iii secretion system export apparatus protein | EEP23_25895 | Not Available | Negative | 5123932 - 5124597 | 24696.6 |
| yscq/hrcq family type iii secretion apparatus protein | EEP23_25900 | Not Available | Negative | 5124587 - 5124723 | 4850.65 |
| tetratricopeptide repeat protein | EEP23_25905 | Not Available | Positive | 5124946 - 5125989 | 40290.6 |
| is3 family transposase | EEP23_25915 | Not Available | Positive | 5126663 - 5126986 | 12612.2 |
| hypothetical protein | EEP23_25925 | Not Available | Negative | 5127639 - 5128283 | 25423.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





