Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306421 bp
Thymine Count
1288537 bp
Guanine Count
1329606 bp
Cytosine Count
1345236 bp
Genome Length
5287180 bp
Protein-coding Genes
4824 genes
Non-Coding Genes
381 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath small subunit | EEP23_24670 | Not Available | Positive | 4939510 - 4939986 | 17937.2 |
| type vi secretion system contractile sheath large subunit | EEP23_24675 | Not Available | Positive | 4939989 - 4941467 | 55206.3 |
| type vi secretion system protein aaic/hcp2 | EEP23_24680 | Not Available | Positive | 4941477 - 4941983 | 18801.5 |
| hypothetical protein | EEP23_24685 | Not Available | Positive | 4941993 - 4942415 | 16133.9 |
| type vi secretion system baseplate subunit tssf | EEP23_24690 | Not Available | Positive | 4942408 - 4944210 | 68629.8 |
| type vi secretion system baseplate subunit tssg | EEP23_24695 | Not Available | Positive | 4944201 - 4945084 | 33579.1 |
| recombinase family protein | EEP23_24700 | Not Available | Positive | 4945085 - 4945622 | 20211.6 |
| sialate o-acetylesterase | EEP23_24705 | Not Available | Positive | 4945708 - 4947762 | 72414.9 |
| duf1378 family protein | EEP23_24710 | Not Available | Positive | 4947907 - 4948089 | 6720.33 |
| duf826 domain-containing protein | EEP23_24715 | Not Available | Positive | 4948125 - 4948379 | 9074.64 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





