Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306421 bp
Thymine Count
1288537 bp
Guanine Count
1329606 bp
Cytosine Count
1345236 bp
Genome Length
5287180 bp
Protein-coding Genes
4824 genes
Non-Coding Genes
381 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssk | EEP23_24470 | Not Available | Positive | 4906537 - 4907949 | 54715.7 |
| hypothetical protein | EEP23_24475 | Not Available | Positive | 4908067 - 4908291 | 8483.63 |
| dotu family type iv/vi secretion system protein | EEP23_24480 | Not Available | Positive | 4908288 - 4908851 | 21596.0 |
| conjugal transfer protein traj | EEP23_24485 | Not Available | Positive | 4908852 - 4909009 | 5922.48 |
| relaxosome protein tray | EEP23_24490 | Not Available | Positive | 4909097 - 4909324 | 9072.72 |
| type iv conjugative transfer system pilin traa | EEP23_24495 | Not Available | Positive | 4909358 - 4909720 | 12843.4 |
| type iv conjugative transfer system protein tral | EEP23_24500 | Not Available | Positive | 4909725 - 4910036 | 11904.7 |
| protein trae | EEP23_24505 | Not Available | Positive | 4910058 - 4910624 | 21225.5 |
| type-f conjugative transfer system secretin trak | EEP23_24510 | Not Available | Positive | 4910668 - 4911339 | 23585.0 |
| hypothetical protein | EEP23_24515 | Not Available | Positive | 4911339 - 4912211 | 31473.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





