Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306421 bp
Thymine Count
1288537 bp
Guanine Count
1329606 bp
Cytosine Count
1345236 bp
Genome Length
5287180 bp
Protein-coding Genes
4824 genes
Non-Coding Genes
381 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tagaturonate reductase | EEP23_17970 | Not Available | Negative | 3722367 - 3723818 | 54758.2 |
| ggdef domain-containing protein | EEP23_17975 | Not Available | Negative | 3724045 - 3724992 | 34324.3 |
| duf4186 domain-containing protein | EEP23_17980 | Not Available | Negative | 3725104 - 3725463 | 13544.5 |
| glutaminase 2 | EEP23_17985 | Not Available | Negative | 3725463 - 3726389 | 33517.6 |
| succinate semialdehyde dehydrogenase | EEP23_17990 | Not Available | Negative | 3726453 - 3727841 | 49720.7 |
| lysr family transcriptional regulator | EEP23_17995 | Not Available | Positive | 3727942 - 3728823 | 32484.9 |
| putative protein ynek | EEP23_18000 | Not Available | Positive | 3728901 - 3729000 | 3733.53 |
| hypothetical protein | EEP23_18160 | Not Available | Positive | 3751870 - 3752067 | 6861.34 |
| type vi secretion system contractile sheath small subunit | EEP23_18165 | Not Available | Positive | 3752513 - 3753013 | 18052.4 |
| hypothetical protein | EEP23_18170 | Not Available | Positive | 3753048 - 3753272 | 8411.01 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





