Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306421 bp
Thymine Count
1288537 bp
Guanine Count
1329606 bp
Cytosine Count
1345236 bp
Genome Length
5287180 bp
Protein-coding Genes
4824 genes
Non-Coding Genes
381 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose operon repressor | EEP23_14920 | Not Available | Positive | 3109050 - 3110042 | 36614.1 |
| mfs transporter | EEP23_14925 | Not Available | Negative | 3110008 - 3111435 | 51483.0 |
| transcriptional regulator | EEP23_14930 | Not Available | Negative | 3111458 - 3112150 | 26077.5 |
| nickel-responsive transcriptional regulator nikr | EEP23_14935 | Not Available | Negative | 3112495 - 3112896 | 15126.7 |
| nickel import atp-binding protein nike | EEP23_14940 | Not Available | Negative | 3112902 - 3113708 | 29723.5 |
| nickel import atp-binding protein nikd | EEP23_14945 | Not Available | Negative | 3113705 - 3114469 | 26822.1 |
| nickel abc transporter permease subunit nikc | EEP23_14950 | Not Available | Negative | 3114469 - 3115302 | 30363.8 |
| nickel abc transporter permease subunit nikb | EEP23_14955 | Not Available | Negative | 3115299 - 3116243 | 35250.3 |
| nickel-binding periplasmic protein | EEP23_14960 | Not Available | Negative | 3116243 - 3117817 | 58722.1 |
| 4'-phosphopantetheinyl transferase | EEP23_14965 | Not Available | Negative | 3117928 - 3118515 | 21769.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





