Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain PNUSAE019721 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1306421 bp
Thymine Count
1288537 bp
Guanine Count
1329606 bp
Cytosine Count
1345236 bp
Genome Length
5287180 bp
Protein-coding Genes
4824 genes
Non-Coding Genes
381 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase ding | EEP23_11450 | Not Available | Positive | 2325257 - 2327407 | 81444.9 |
| dna-binding protein ybib | EEP23_11455 | Not Available | Positive | 2327435 - 2328397 | 35050.7 |
| malate/lactate/ureidoglycolate dehydrogenase | EEP23_11460 | Not Available | Positive | 2328538 - 2329623 | 38899.3 |
| duf1471 domain-containing protein | EEP23_11465 | Not Available | Negative | 2329852 - 2330112 | 8568.2 |
| dksa/trar family c4-type zinc finger protein | EEP23_11470 | Not Available | Negative | 2330377 - 2330643 | 9756.33 |
| fe2+-dependent dioxygenase | EEP23_11475 | Not Available | Negative | 2330717 - 2331394 | 25530.2 |
| glutamate racemase | EEP23_11480 | Not Available | Negative | 2331432 - 2332289 | 31003.7 |
| vitamin b12 transporter btub | EEP23_11485 | Not Available | Negative | 2332234 - 2334078 | 68410.7 |
| trna (uridine(54)-c5)-methyltransferase trma | EEP23_11490 | Not Available | Positive | 2334447 - 2335547 | 41969.3 |
| yijd family membrane protein | EEP23_11495 | Not Available | Negative | 2335587 - 2335946 | 13024.3 |
Pathways
362 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





