Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | D9E35_18685 | Not Available | Positive | 3915719 - 3916840 | 41323.7 |
| hydrogenase expression/formation protein hype | D9E35_18690 | Not Available | Positive | 3916837 - 3917847 | 35096.6 |
| formate hydrogenlyase transcriptional activator flha | D9E35_18695 | Not Available | Positive | 3917921 - 3919999 | 78415.4 |
| nitrous oxide-stimulated promoter family protein | D9E35_18700 | Not Available | Negative | 3920036 - 3920389 | 13904.1 |
| hypothetical protein | D9E35_18705 | Not Available | Negative | 3920421 - 3920600 | 6724.75 |
| dna mismatch repair protein muts | D9E35_18710 | Not Available | Positive | 3920676 - 3923237 | 95224.5 |
| protein-serine/threonine phosphatase | D9E35_18715 | Not Available | Positive | 3923343 - 3923999 | 25087.7 |
| hypothetical protein | D9E35_18720 | Not Available | Negative | 3924040 - 3924276 | 9180.06 |
| ubid family decarboxylase | D9E35_18725 | Not Available | Negative | 3924287 - 3925714 | 52426.9 |
| ubix family flavin prenyltransferase | D9E35_18730 | Not Available | Negative | 3925714 - 3926307 | 21346.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





