Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuob | D9E35_18635 | Not Available | Negative | 3907026 - 3907793 | 27999.7 |
| 4fe-4s dicluster domain-containing protein | D9E35_18640 | Not Available | Negative | 3907793 - 3908335 | 20329.4 |
| hydrogenase large subunit | D9E35_18645 | Not Available | Negative | 3908345 - 3910054 | 65000.1 |
| hydrogenase 3 membrane subunit | D9E35_18650 | Not Available | Negative | 3910072 - 3910995 | 33073.5 |
| formate hydrogenlyase subunit 3 | D9E35_18655 | Not Available | Negative | 3910998 - 3912824 | 64157.2 |
| formate hydrogenlyase subunit 2 | D9E35_18660 | Not Available | Negative | 3912821 - 3913432 | 21874.4 |
| formate hydrogenlyase regulatory protein hyca | D9E35_18665 | Not Available | Negative | 3913557 - 3914018 | 17627.9 |
| protein hypa | D9E35_18670 | Not Available | Positive | 3914230 - 3914580 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | D9E35_18675 | Not Available | Positive | 3914584 - 3915456 | 31566.8 |
| hydrogenase assembly protein hypc | D9E35_18680 | Not Available | Positive | 3915447 - 3915719 | 9732.58 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





