Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9E35_18335 | Not Available | Positive | 3849366 - 3851618 | 85175.1 |
| carbon starvation induced protein csid | D9E35_18340 | Not Available | Positive | 3851955 - 3852932 | 37362.6 |
| l-2-hydroxyglutarate oxidase | D9E35_18345 | Not Available | Positive | 3852952 - 3854220 | 46039.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | D9E35_18350 | Not Available | Positive | 3854243 - 3855691 | 51806.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | D9E35_18355 | Not Available | Positive | 3855705 - 3856985 | 45665.3 |
| gaba permease | D9E35_18360 | Not Available | Positive | 3857494 - 3858894 | 51069.1 |
| transcriptional regulator | D9E35_18365 | Not Available | Positive | 3858915 - 3859577 | 24964.3 |
| peptidoglycan-binding protein lysm | D9E35_18370 | Not Available | Negative | 3859578 - 3860027 | 16030.0 |
| yqae/pmp3 family membrane protein | D9E35_18375 | Not Available | Negative | 3860111 - 3860269 | 5865.57 |
| transcriptional regulator | D9E35_18380 | Not Available | Positive | 3860452 - 3860751 | 10596.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





