Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein assembly factor bame | D9E35_18285 | Not Available | Positive | 3838559 - 3838900 | 12302.8 |
| rnfh family protein | D9E35_18290 | Not Available | Negative | 3838962 - 3839252 | 10790.0 |
| ubiquinone-binding protein | D9E35_18295 | Not Available | Negative | 3839242 - 3839718 | 17743.7 |
| ssra-binding protein | D9E35_18300 | Not Available | Positive | 3839850 - 3840332 | 18270.1 |
| Tmrna,resume consensus sequence (at 83): aatagtcgcaaacgacga | Not Available | Not Available | Positive | 3840547 - 3840909 | Not Available |
| autotransporter outer membrane beta-barrel domain-containing protein | D9E35_18310 | Not Available | Negative | 3841070 - 3845650 | 157653.0 |
| atpase | D9E35_18315 | Not Available | Negative | 3845715 - 3845834 | 4328.2 |
| dna invertase | D9E35_18320 | Not Available | Negative | 3845989 - 3846207 | 8151.23 |
| hypothetical protein | D9E35_18325 | Not Available | Negative | 3846586 - 3847980 | 52294.4 |
| Trna-met | Not Available | Not Available | Positive | 3848732 - 3848807 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





