Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(37)-n1)-methyltransferase trmd | D9E35_18235 | Not Available | Negative | 3829637 - 3830404 | 28424.0 |
| ribosome maturation factor rimm | D9E35_18240 | Not Available | Negative | 3830435 - 3830983 | 20606.6 |
| 30s ribosomal protein s16 | D9E35_18245 | Not Available | Negative | 3831002 - 3831250 | 9191.08 |
| signal recognition particle protein | D9E35_18250 | Not Available | Negative | 3831387 - 3832748 | 49790.5 |
| inner membrane protein ypjd | D9E35_18255 | Not Available | Positive | 3832915 - 3833706 | 29263.9 |
| duf21 domain-containing protein | D9E35_18260 | Not Available | Positive | 3833773 - 3835014 | 46353.9 |
| nucleotide exchange factor grpe | D9E35_18265 | Not Available | Negative | 3835069 - 3835662 | 21813.1 |
| molecular chaperone grpe | D9E35_18270 | Not Available | Negative | 3835659 - 3835853 | 7202.78 |
| nad(+) kinase | D9E35_18275 | Not Available | Positive | 3835785 - 3836663 | 32568.3 |
| dna repair protein recn | D9E35_18280 | Not Available | Positive | 3836749 - 3838410 | 61388.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





