Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-o iron-sulfur subunit | D9E35_17695 | Not Available | Positive | 3740556 - 3741458 | 33102.1 |
| formate dehydrogenase cytochrome b556(fdo) subunit | D9E35_17700 | Not Available | Positive | 3741455 - 3742090 | 24607.7 |
| formate dehydrogenase accessory protein fdhe | D9E35_17705 | Not Available | Positive | 3742087 - 3743016 | 34690.5 |
| hypothetical protein | D9E35_17710 | Not Available | Negative | 3743346 - 3743588 | 9273.0 |
| copg family transcriptional regulator | D9E35_17715 | Not Available | Negative | 3743808 - 3744026 | 8571.42 |
| helix-turn-helix domain-containing protein | D9E35_17720 | Not Available | Negative | 3744612 - 3744902 | 10847.1 |
| type ii toxin-antitoxin system rele/pare family toxin | D9E35_17725 | Not Available | Negative | 3744903 - 3745214 | 12190.9 |
| alpha/beta hydrolase | D9E35_17730 | Not Available | Positive | 3745443 - 3746351 | 33638.2 |
| gnat family n-acetyltransferase | D9E35_17735 | Not Available | Negative | 3746415 - 3747404 | 37096.5 |
| d-aminoacyl-trna deacylase | D9E35_17740 | Not Available | Negative | 3747401 - 3747838 | 15951.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





