Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | D9E35_16365 | Not Available | Positive | 3472781 - 3474034 | 45319.2 |
| rok family protein | D9E35_16370 | Not Available | Negative | 3474232 - 3475425 | 44592.4 |
| duf5107 domain-containing protein | D9E35_16375 | Not Available | Positive | 3475543 - 3478824 | 123880.0 |
| sugar abc transporter substrate-binding protein | D9E35_16380 | Not Available | Positive | 3478921 - 3479904 | 35057.2 |
| sugar abc transporter atp-binding protein | D9E35_16385 | Not Available | Positive | 3479927 - 3481438 | 55014.8 |
| abc transporter permease | D9E35_16390 | Not Available | Positive | 3481463 - 3482461 | 34517.7 |
| alcohol dehydrogenase | D9E35_16395 | Not Available | Positive | 3482527 - 3483588 | 38037.1 |
| aldose 1-epimerase | D9E35_16400 | Not Available | Positive | 3483600 - 3484472 | 32642.1 |
| doxx family protein | D9E35_16405 | Not Available | Negative | 3484520 - 3484942 | 15198.3 |
| phenylpropionate dioxygenase ferredoxin reductase subunit | D9E35_16410 | Not Available | Negative | 3485039 - 3486241 | 43922.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





