Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autonomous glycyl radical cofactor grca | D9E35_16215 | Not Available | Positive | 3441991 - 3442374 | 14285.0 |
| cysteine/o-acetylserine transporter | D9E35_16220 | Not Available | Negative | 3442430 - 3443017 | 21321.6 |
| lysr family transcriptional regulator | D9E35_16225 | Not Available | Positive | 3443120 - 3444001 | 33349.4 |
| atp-dependent rna helicase srmb | D9E35_16230 | Not Available | Negative | 3444036 - 3445370 | 49901.0 |
| trna(1)(val) (adenine(37)-n(6))-methyltransferase | D9E35_16235 | Not Available | Positive | 3445502 - 3446239 | 27198.3 |
| l-aspartate oxidase | D9E35_16240 | Not Available | Negative | 3446224 - 3447846 | 60279.9 |
| rpoe leader peptide rsed | D9E35_16245 | Not Available | Positive | 3448102 - 3448257 | 6229.83 |
| ecf rna polymerase sigma-e factor | D9E35_16250 | Not Available | Positive | 3448254 - 3448829 | 21697.0 |
| anti-sigma-e factor rsea | D9E35_16255 | Not Available | Positive | 3448862 - 3449512 | 24322.8 |
| sigma-e factor regulatory protein rseb | D9E35_16260 | Not Available | Positive | 3449512 - 3450468 | 35751.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





