Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autoinducer 2 import system permease lsrd | D9E35_16005 | Not Available | Positive | 3397660 - 3398652 | 34474.6 |
| autoinducer 2 abc transporter substrate-binding protein | D9E35_16010 | Not Available | Positive | 3398664 - 3399686 | 36686.9 |
| 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase lsrf | D9E35_16015 | Not Available | Positive | 3399713 - 3400588 | 31866.6 |
| autoinducer 2-degrading protein lsrg | D9E35_16020 | Not Available | Positive | 3400612 - 3400902 | 11255.4 |
| trans-aconitate 2-methyltransferase | D9E35_16025 | Not Available | Positive | 3400959 - 3401717 | 28979.4 |
| hypothetical protein | D9E35_16030 | Not Available | Negative | 3401721 - 3402635 | 34823.0 |
| tagaturonate reductase | D9E35_16035 | Not Available | Negative | 3402832 - 3404283 | 54890.4 |
| diguanylate cyclase | D9E35_16040 | Not Available | Negative | 3404510 - 3405928 | 52169.5 |
| duf4186 domain-containing protein | D9E35_16045 | Not Available | Negative | 3406067 - 3406426 | 13548.5 |
| glutaminase 2 | D9E35_16050 | Not Available | Negative | 3406426 - 3407352 | 33517.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





