Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate transporter foca | D9E35_13485 | Not Available | Negative | 2822247 - 2823104 | 31020.6 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | D9E35_13490 | Not Available | Negative | 2823510 - 2825270 | 65640.9 |
| duf421 domain-containing protein | D9E35_13495 | Not Available | Positive | 2825400 - 2826092 | 26269.4 |
| 3-phosphoserine/phosphohydroxythreonine aminotransferase | D9E35_13500 | Not Available | Positive | 2826291 - 2827379 | 39842.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | D9E35_13505 | Not Available | Positive | 2827450 - 2828733 | 46064.5 |
| metalloprotease | D9E35_13510 | Not Available | Positive | 2828902 - 2829666 | 26796.7 |
| cytidylate kinase | D9E35_13515 | Not Available | Positive | 2829839 - 2830522 | 24747.8 |
| 30s ribosomal protein s1 | D9E35_13520 | Not Available | Positive | 2830633 - 2832306 | 61161.5 |
| integration host factor subunit beta | D9E35_13525 | Not Available | Positive | 2832466 - 2832750 | 10651.8 |
| comec family protein | D9E35_13530 | Not Available | Positive | 2832957 - 2835221 | 84543.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





