Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | D9E35_12255 | Not Available | Negative | 2541595 - 2542116 | 19539.2 |
| dna transporter hofq | D9E35_12260 | Not Available | Negative | 2542517 - 2543755 | 44776.9 |
| duf2531 family protein | D9E35_12265 | Not Available | Negative | 2543667 - 2544071 | 15097.1 |
| dna utilization protein hofo | D9E35_12270 | Not Available | Negative | 2544061 - 2544501 | 17020.3 |
| dna utilization protein hofn | D9E35_12275 | Not Available | Negative | 2544485 - 2545024 | 20853.2 |
| dna utilization protein hofm | D9E35_12280 | Not Available | Negative | 2545024 - 2545803 | 29064.0 |
| carboxypeptidase/penicillin-binding protein 1a | D9E35_12285 | Not Available | Positive | 2545923 - 2548475 | 93612.4 |
| adp compounds hydrolase nude | D9E35_12290 | Not Available | Negative | 2548640 - 2549200 | 21154.4 |
| intracellular growth attenuator protein igaa | D9E35_12295 | Not Available | Positive | 2549520 - 2551655 | 79537.5 |
| gmp/imp nucleotidase | D9E35_12300 | Not Available | Positive | 2551720 - 2552388 | 25386.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





