Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dksa/trar family c4-type zinc finger protein | D9E35_10935 | Not Available | Positive | 2279306 - 2279572 | 9804.42 |
| duf1471 domain-containing protein | D9E35_10940 | Not Available | Positive | 2279838 - 2280098 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | D9E35_10945 | Not Available | Negative | 2280327 - 2281412 | 38861.3 |
| dna-binding protein ybib | D9E35_10950 | Not Available | Negative | 2281553 - 2282515 | 35050.7 |
| atp-dependent helicase ding | D9E35_10955 | Not Available | Negative | 2282543 - 2284693 | 81459.9 |
| type iii effector | D9E35_10960 | Not Available | Negative | 2284977 - 2286989 | 76841.4 |
| atp-dependent rna helicase rhle | D9E35_10965 | Not Available | Negative | 2287597 - 2288961 | 50021.6 |
| transcriptional regulator | D9E35_10970 | Not Available | Positive | 2289190 - 2289861 | 25018.1 |
| secretion protein hlyd | D9E35_10975 | Not Available | Positive | 2289864 - 2290859 | 36287.7 |
| abc transporter atp-binding protein | D9E35_10980 | Not Available | Positive | 2290852 - 2292588 | 63163.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





