Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | D9E35_10635 | Not Available | Negative | 2216292 - 2217419 | 41914.1 |
| duf2593 family protein | D9E35_10640 | Not Available | Negative | 2217460 - 2217948 | 18507.1 |
| spermidine/putrescine abc transporter permease | D9E35_10645 | Not Available | Negative | 2218008 - 2218853 | 30542.4 |
| putrescine abc transporter permease poth | D9E35_10650 | Not Available | Negative | 2218850 - 2219803 | 35446.5 |
| putrescine abc transporter atp-binding subunit potg | D9E35_10655 | Not Available | Negative | 2219813 - 2220946 | 41981.4 |
| spermidine/putrescine abc transporter substrate-binding protein potf | D9E35_10660 | Not Available | Negative | 2221041 - 2222153 | 40783.7 |
| ybjn domain-containing protein | D9E35_10665 | Not Available | Negative | 2222504 - 2222980 | 17667.1 |
| 30s ribosomal protein s6--l-glutamate ligase | D9E35_10670 | Not Available | Negative | 2223068 - 2223970 | 32438.5 |
| nitroreductase nfsa | D9E35_10675 | Not Available | Negative | 2224031 - 2224753 | 26865.1 |
| duf1418 family protein | D9E35_10680 | Not Available | Negative | 2224737 - 2225024 | 10551.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





