Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | D9E35_10585 | Not Available | Positive | 2204026 - 2204850 | 29741.1 |
| shet2/espl2 family type iii secretion system effector toxin | D9E35_10590 | Not Available | Positive | 2205167 - 2207353 | 82566.9 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | D9E35_10595 | Not Available | Negative | 2207322 - 2209058 | 67727.5 |
| isocitrate lyase | D9E35_10600 | Not Available | Negative | 2209242 - 2210546 | 47510.0 |
| malate synthase a | D9E35_10605 | Not Available | Negative | 2210576 - 2212177 | 60338.0 |
| homoserine o-succinyltransferase | D9E35_10610 | Not Available | Negative | 2212446 - 2213375 | 35745.2 |
| acetyltransferase | D9E35_10615 | Not Available | Positive | 2213532 - 2213975 | 16468.7 |
| hypothetical protein | D9E35_10620 | Not Available | Negative | 2214052 - 2214315 | 10069.2 |
| pts sugar transporter subunit iib | D9E35_10625 | Not Available | Negative | 2214327 - 2214647 | 11864.4 |
| pts sugar transporter subunit iic | D9E35_10630 | Not Available | Negative | 2214669 - 2216012 | 48547.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





