Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC0248 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1337776 bp
Thymine Count
1322231 bp
Guanine Count
1343905 bp
Cytosine Count
1380785 bp
Genome Length
5389732 bp
Protein-coding Genes
4773 genes
Non-Coding Genes
415 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | D9E35_08635 | Not Available | Positive | 1809956 - 1810417 | 17433.8 |
| trna 2-thiouridine(34) synthase mnma | D9E35_08640 | Not Available | Positive | 1810471 - 1811577 | 40975.7 |
| lysogenization protein hfld | D9E35_08645 | Not Available | Positive | 1811613 - 1812254 | 22949.0 |
| adenylosuccinate lyase | D9E35_08650 | Not Available | Positive | 1812258 - 1813628 | 51572.7 |
| two-component system response regulator phop | D9E35_08655 | Not Available | Positive | 1813797 - 1814468 | 25536.7 |
| two-component system sensor histidine kinase phoq | D9E35_08660 | Not Available | Positive | 1814468 - 1815928 | 55316.9 |
| 50s ribosomal protein l16 arginine hydroxylase | D9E35_08665 | Not Available | Positive | 1816004 - 1817125 | 42567.2 |
| peptidase t | D9E35_08670 | Not Available | Negative | 1817174 - 1818400 | 44912.0 |
| spermidine/putrescine abc transporter atp-binding protein pota | D9E35_08675 | Not Available | Positive | 1818649 - 1819785 | 42977.6 |
| spermidine/putrescine abc transporter permease potb | D9E35_08680 | Not Available | Positive | 1819769 - 1820626 | 32226.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





