Escherichia coli strain CVM N17EC1046

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain CVM N17EC1046 is a Gram-negative, facultative anaerobic rod that exhibits mobility due to the presence of flagella. This strain is mesophilic, with an optimal growth temperature of 37°C. It typically exists in pairs or as single cells and has a biotic relationship characterized as free-living, with a single replicon and two membranes. CVM N17EC1046 is primarily host-associated, with a diverse range of potential hosts including Homo sapiens (humans), various livestock such as Bos taurus (cattle) and Sus scrofa (pigs), as well as numerous other vertebrates and invertebrates. The strain is known to cause a variety of health effects, particularly in humans, including urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and several other serious diseases such as septicemia and hemolytic uremic syndrome (HUS). It is also associated with conditions affecting livestock, leading to economic losses in agriculture. The ecological significance of E. coli strain CVM N17EC1046 stems from its ability to thrive in various hosts, potentially facilitating its spread in environments shared by humans and animals. This adaptability not only underscores the importance of monitoring E. coli strains in both clinical and agricultural settings but also highlights the interconnectedness of human and animal health, as well as the implications for public health concerning foodborne infections and zoonotic diseases.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain CVM N17EC1046

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain CVM N17EC1046
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain CVM N17EC1046

Gene Summary

Adenine Count

1252394 bp

Thymine Count

1239941 bp

Guanine Count

1240746 bp

Cytosine Count

1307638 bp

Genome Length

5043051 bp

Protein-coding Genes

4580 genes

Non-Coding Genes

348 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Injection proteinD9I20_13085Not AvailablePositive2734703 - 273611850721.4
Injection proteinD9I20_13090Not AvailablePositive2736118 - 273795664727.3
Hypothetical proteinD9I20_13095Not AvailableNegative2737981 - 273834913148.6
Hypothetical proteinD9I20_13100Not AvailablePositive2738487 - 273890614568.5
MntD9I20_13105Not AvailableNegative2738923 - 27391749675.6
RepressorD9I20_13110Not AvailablePositive2739265 - 27394266199.61
AntirepressorD9I20_13115Not AvailablePositive2739495 - 274037333286.7
Bifunctional tail proteinD9I20_13120Not AvailablePositive2740474 - 274081812755.2
Cps-53 (kple1) prophageD9I20_13125Not AvailableNegative2742650 - 27427333555.16
AttrNot AvailableNot AvailablePositive2742923 - 2742934Not Available

Displaying genes 61 – 70 of 4934 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total