Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional chorismate mutase/prephenate dehydrogenase | D9I11_22450 | Not Available | Positive | 4574198 - 4575319 | 42016.9 |
| bifunctional chorismate mutase/prephenate dehydratase | D9I11_22455 | Not Available | Negative | 4575362 - 4576522 | 43072.8 |
| hypothetical protein | D9I11_22460 | Not Available | Negative | 4576621 - 4576668 | 1912.35 |
| ribosome-associated inhibitor a | D9I11_22465 | Not Available | Negative | 4576772 - 4577113 | 12785.3 |
| outer membrane protein assembly factor bamd | D9I11_22470 | Not Available | Negative | 4577384 - 4578121 | 27830.9 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | D9I11_22475 | Not Available | Positive | 4578256 - 4579236 | 37139.9 |
| peptidoglycan editing factor pgef | D9I11_22480 | Not Available | Positive | 4579233 - 4579964 | 26395.5 |
| chaperone protein clpb | D9I11_22485 | Not Available | Positive | 4580094 - 4582667 | 95590.8 |
| glutamate:gamma-aminobutyrate antiporter | D9I11_22490 | Not Available | Positive | 4583220 - 4584755 | 55080.0 |
| glycoside hydrolase family 10 protein | D9I11_22495 | Not Available | Positive | 4584886 - 4586205 | 49603.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





