Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21-like element is100 family transposase | D9I11_21590 | Not Available | Negative | 4411890 - 4412912 | 39815.1 |
| integrase | D9I11_21595 | Not Available | Negative | 4412926 - 4413033 | 3776.66 |
| type ii toxin-antitoxin system rele/pare family toxin | D9I11_21610 | Not Available | Negative | 4413788 - 4414075 | 11105.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | D9I11_21615 | Not Available | Negative | 4414072 - 4414323 | 9211.91 |
| incfii family plasmid replication initiator repa | D9I11_21620 | Not Available | Negative | 4415287 - 4416144 | 32700.6 |
| hypothetical protein | D9I11_21625 | Not Available | Negative | 4416137 - 4416631 | 18234.0 |
| repa leader peptide tap | D9I11_21630 | Not Available | Negative | 4416612 - 4416686 | 2588.29 |
| replication protein repa | D9I11_21635 | Not Available | Positive | 4416765 - 4416896 | 4818.73 |
| replication regulatory protein repa | D9I11_21640 | Not Available | Negative | 4416918 - 4417175 | 9595.37 |
| type i toxin-antitoxin system hok family toxin | D9I11_21645 | Not Available | Negative | 4417459 - 4417608 | 5543.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





