Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ydcf family protein | D9I11_18570 | Not Available | Positive | 3814985 - 3815785 | 29721.4 |
| aldehyde dehydrogenase | D9I11_18575 | Not Available | Positive | 3815982 - 3817421 | 52256.8 |
| cytochrome b561 | D9I11_18585 | Not Available | Positive | 3818655 - 3819185 | 20273.6 |
| hypothetical protein | D9I11_18590 | Not Available | Positive | 3819430 - 3819603 | 5860.19 |
| protein hokb | D9I11_18595 | Not Available | Negative | 3819675 - 3819824 | 5626.16 |
| hamp domain-containing protein | D9I11_18605 | Not Available | Positive | 3820223 - 3821863 | 58929.4 |
| lysr family transcriptional regulator | D9I11_18610 | Not Available | Negative | 3821901 - 3822824 | 33375.5 |
| voc family protein | D9I11_18615 | Not Available | Positive | 3823041 - 3824384 | 51045.6 |
| glucan biosynthesis protein d | D9I11_18620 | Not Available | Positive | 3824609 - 3826264 | 62771.2 |
| duf465 domain-containing protein | D9I11_18625 | Not Available | Positive | 3826404 - 3826628 | 8878.79 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





