Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoadipyl coa thiolase | D9I11_18510 | Not Available | Positive | 3797576 - 3798781 | 42279.2 |
| phenylacetate--coa ligase | D9I11_18515 | Not Available | Positive | 3798808 - 3800121 | 48969.8 |
| phenylacetic acid degradation operon negative regulatory protein paax | D9I11_18520 | Not Available | Positive | 3800222 - 3801172 | 35284.6 |
| phenylacetic acid degradation protein paay | D9I11_18525 | Not Available | Positive | 3801154 - 3801744 | 21441.0 |
| oxidoreductase | D9I11_18530 | Not Available | Positive | 3801975 - 3802835 | 30707.8 |
| cdp-alcohol phosphatidyltransferase family protein | D9I11_18540 | Not Available | Positive | 3805375 - 3805980 | 22654.6 |
| hypothetical protein | D9I11_18545 | Not Available | Positive | 3805980 - 3806876 | 33279.0 |
| hypothetical protein | D9I11_18555 | Not Available | Positive | 3808638 - 3809954 | 50514.6 |
| fmn-dependent nadh-azoreductase | D9I11_18560 | Not Available | Negative | 3810005 - 3810610 | 21642.9 |
| atp-dependent rna helicase hrpa | D9I11_18565 | Not Available | Positive | 3810811 - 3814713 | 148939.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





