Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose isomerase | D9I11_16835 | Not Available | Positive | 3435662 - 3437437 | 65010.3 |
| l-fuculokinase | D9I11_16840 | Not Available | Positive | 3437546 - 3438964 | 52219.6 |
| l-fucose mutarotase | D9I11_16845 | Not Available | Positive | 3438966 - 3439388 | 15474.0 |
| l-fucose operon activator | D9I11_16850 | Not Available | Positive | 3439446 - 3440177 | 27363.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | D9I11_16855 | Not Available | Negative | 3440221 - 3441321 | 41907.5 |
| duf423 domain-containing protein | D9I11_16860 | Not Available | Negative | 3441314 - 3441709 | 14334.0 |
| glycine cleavage system transcriptional activator | D9I11_16865 | Not Available | Negative | 3441728 - 3442645 | 34403.4 |
| ygdi/ygdr family lipoprotein | D9I11_16870 | Not Available | Negative | 3442996 - 3443223 | 8174.67 |
| cysteine desulfurase csda | D9I11_16875 | Not Available | Positive | 3443415 - 3444620 | 43236.6 |
| cysteine desulfurase sulfur acceptor subunit csde | D9I11_16880 | Not Available | Positive | 3444620 - 3445063 | 15955.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





