Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i-e crispr-associated endoribonuclease cas2 | D9I11_16625 | Not Available | Negative | 3386468 - 3386761 | 11004.4 |
| type i-e crispr-associated endonuclease cas1 | D9I11_16630 | Not Available | Negative | 3386758 - 3387681 | 33456.7 |
| type i-e crispr-associated protein cas6/cse3/case | D9I11_16635 | Not Available | Negative | 3387678 - 3388328 | 24829.8 |
| type i-e crispr-associated protein cas5/casd | D9I11_16640 | Not Available | Negative | 3388310 - 3389056 | 28626.0 |
| type i-e crispr-associated protein cas7/cse4/casc | D9I11_16645 | Not Available | Negative | 3389067 - 3390140 | 39168.6 |
| type i-e crispr-associated protein cse2/casb | D9I11_16650 | Not Available | Negative | 3390155 - 3390688 | 20673.7 |
| type i-e crispr-associated protein cse1/casa | D9I11_16655 | Not Available | Negative | 3390685 - 3392247 | 59691.4 |
| crispr-associated helicase/endonuclease cas3 | D9I11_16660 | Not Available | Negative | 3392345 - 3395044 | 101935.0 |
| type i toxin-antitoxin system hok family toxin | D9I11_16665 | Not Available | Negative | 3395237 - 3395389 | 5559.11 |
| phosphoadenosine phosphosulfate reductase | D9I11_16675 | Not Available | Negative | 3395654 - 3396388 | 27991.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





