Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase formation protein hypd | D9I11_16475 | Not Available | Positive | 3357157 - 3358278 | 41366.7 |
| hydrogenase expression/formation protein hype | D9I11_16480 | Not Available | Positive | 3358275 - 3359285 | 35112.6 |
| formate hydrogenlyase transcriptional activator flha | D9I11_16485 | Not Available | Positive | 3359359 - 3361437 | 78443.5 |
| nitrous oxide-stimulated promoter family protein | D9I11_16490 | Not Available | Negative | 3361474 - 3361827 | 13960.3 |
| hypothetical protein | D9I11_16495 | Not Available | Negative | 3361859 - 3362038 | 6742.79 |
| dna mismatch repair protein muts | D9I11_16500 | Not Available | Positive | 3362114 - 3364675 | 95296.5 |
| protein-serine/threonine phosphatase | D9I11_16505 | Not Available | Positive | 3364781 - 3365437 | 25086.6 |
| deor/glpr transcriptional regulator | D9I11_16510 | Not Available | Negative | 3365488 - 3366255 | 27407.2 |
| nad(p)-dependent oxidoreductase | D9I11_16515 | Not Available | Positive | 3366451 - 3367359 | 30693.0 |
| 3-oxo-tetronate kinase | D9I11_16520 | Not Available | Positive | 3367356 - 3368618 | 44860.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





