Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit nuob | D9I11_16425 | Not Available | Negative | 3348464 - 3349231 | 28013.8 |
| 4fe-4s dicluster domain-containing protein | D9I11_16430 | Not Available | Negative | 3349231 - 3349773 | 20330.4 |
| formate hydrogenlyase subunit 5 | D9I11_16435 | Not Available | Negative | 3349783 - 3351492 | 64970.1 |
| hydrogenase 3 membrane subunit | D9I11_16440 | Not Available | Negative | 3351510 - 3352433 | 33065.4 |
| formate hydrogenlyase subunit 3 | D9I11_16445 | Not Available | Negative | 3352436 - 3354262 | 64117.2 |
| 4fe-4s dicluster domain-containing protein | D9I11_16450 | Not Available | Negative | 3354259 - 3354870 | 21869.4 |
| formate hydrogenlyase regulatory protein hyca | D9I11_16455 | Not Available | Negative | 3354995 - 3355456 | 17627.9 |
| protein hypa | D9I11_16460 | Not Available | Positive | 3355668 - 3356018 | 13168.9 |
| hydrogenase isoenzymes nickel incorporation protein hypb | D9I11_16465 | Not Available | Positive | 3356022 - 3356894 | 31566.8 |
| hypc/hybg/hupf family hydrogenase formation chaperone | D9I11_16470 | Not Available | Positive | 3356885 - 3357157 | 9731.64 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





