Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D9I11_16125 | Not Available | Positive | 3292732 - 3293085 | 12643.2 |
| carbon starvation induced protein csid | D9I11_16130 | Not Available | Positive | 3293421 - 3294398 | 37416.6 |
| l-2-hydroxyglutarate oxidase | D9I11_16135 | Not Available | Positive | 3294418 - 3295686 | 46039.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | D9I11_16140 | Not Available | Positive | 3295709 - 3297157 | 51807.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | D9I11_16145 | Not Available | Positive | 3297171 - 3298451 | 45663.3 |
| gaba permease | D9I11_16150 | Not Available | Positive | 3298762 - 3300162 | 51083.1 |
| transcriptional regulator | D9I11_16155 | Not Available | Positive | 3300183 - 3300845 | 24992.3 |
| peptidoglycan-binding protein lysm | D9I11_16160 | Not Available | Negative | 3300846 - 3301295 | 16036.9 |
| yqae/pmp3 family membrane protein | D9I11_16165 | Not Available | Negative | 3301379 - 3301537 | 5865.57 |
| transcriptional regulator | D9I11_16170 | Not Available | Positive | 3301720 - 3302019 | 10596.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





