Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid:lipid a palmitoyltransferase | D9I11_15910 | Not Available | Negative | 3243916 - 3244476 | 21770.6 |
| anaerobic c4-dicarboxylate transporter dcuc | D9I11_15915 | Not Available | Positive | 3245065 - 3246450 | 48387.2 |
| response regulator | D9I11_15920 | Not Available | Negative | 3246491 - 3247171 | 25454.9 |
| sensor histidine kinase dpib | D9I11_15925 | Not Available | Negative | 3247140 - 3248798 | 61659.7 |
| [citrate (pro-3s)-lyase] ligase | D9I11_15930 | Not Available | Positive | 3249178 - 3250236 | 40079.5 |
| citrate lyase acp | D9I11_15935 | Not Available | Positive | 3250251 - 3250547 | 10689.9 |
| citrate lyase subunit beta | D9I11_15940 | Not Available | Positive | 3250544 - 3251452 | 33111.6 |
| citrate lyase subunit alpha | D9I11_15945 | Not Available | Positive | 3251463 - 3252995 | 55194.0 |
| apo-citrate lyase phosphoribosyl-dephospho-coa transferase | D9I11_15950 | Not Available | Positive | 3252999 - 3253550 | 20202.4 |
| 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme- a synthase | D9I11_15955 | Not Available | Positive | 3253525 - 3254403 | 31646.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





