Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc ribbon-containing protein | D9I11_15810 | Not Available | Negative | 3225530 - 3226012 | 18798.2 |
| leucine--trna ligase | D9I11_15815 | Not Available | Positive | 3226247 - 3228829 | 97241.0 |
| lps assembly lipoprotein lpte | D9I11_15820 | Not Available | Positive | 3228844 - 3229425 | 21357.8 |
| dna polymerase iii subunit delta | D9I11_15825 | Not Available | Positive | 3229425 - 3230456 | 38702.0 |
| nicotinate-nicotinamide nucleotide adenylyltransferase | D9I11_15830 | Not Available | Positive | 3230458 - 3231099 | 24529.3 |
| adenosylcobalamin/alpha-ribazole phosphatase | D9I11_15835 | Not Available | Positive | 3231123 - 3231734 | 23318.8 |
| ribosome silencing factor rsfs | D9I11_15840 | Not Available | Positive | 3231994 - 3232311 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | D9I11_15845 | Not Available | Positive | 3232315 - 3232782 | 17342.1 |
| penicillin-binding protein 2 | D9I11_15850 | Not Available | Positive | 3232813 - 3234714 | 70860.6 |
| rod shape-determining protein roda | D9I11_15855 | Not Available | Positive | 3234717 - 3235829 | 40478.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





