Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | D9I11_14545 | Not Available | Negative | 2949399 - 2950154 | 26540.0 |
| xanthine dehydrogenase molybdenum-binding subunit xdha | D9I11_14550 | Not Available | Positive | 2950569 - 2952866 | 82663.0 |
| xanthine dehydrogenase fad-binding subunit xdhb | D9I11_14555 | Not Available | Positive | 2952877 - 2953755 | 31548.6 |
| xanthine dehydrogenase iron sulfur-binding subunit xdhc | D9I11_14560 | Not Available | Positive | 2953752 - 2954231 | 16850.7 |
| sigma-54-dependent fis family transcriptional regulator | D9I11_14565 | Not Available | Negative | 2954271 - 2956049 | 66085.0 |
| knotted carbamoyltransferase ygew | D9I11_14570 | Not Available | Positive | 2956528 - 2957715 | 44041.7 |
| plp-dependent lyase/thiolase | D9I11_14575 | Not Available | Positive | 2957773 - 2958969 | 43330.1 |
| ygey family selenium metabolism-linked hydrolase | D9I11_14580 | Not Available | Positive | 2959027 - 2960238 | 44820.4 |
| d-phenylhydantoinase | D9I11_14585 | Not Available | Positive | 2960291 - 2961676 | 51046.2 |
| carbamate kinase-like protein yqea | D9I11_14590 | Not Available | Positive | 2961724 - 2962656 | 33072.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





