Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter permease | D9I11_13415 | Not Available | Positive | 2725096 - 2726061 | 33454.0 |
| ribose abc transporter substrate-binding protein rbsb | D9I11_13420 | Not Available | Positive | 2726086 - 2726976 | 30940.2 |
| ribokinase | D9I11_13425 | Not Available | Positive | 2727102 - 2728031 | 32292.4 |
| transcriptional regulator rbsr | D9I11_13430 | Not Available | Positive | 2728035 - 2729027 | 36573.1 |
| dha2 family efflux mfs transporter permease subunit | D9I11_13435 | Not Available | Negative | 2728993 - 2730420 | 51473.9 |
| fadr family transcriptional regulator | D9I11_13440 | Not Available | Negative | 2730443 - 2731135 | 26063.5 |
| elongation factor tu | D9I11_13445 | Not Available | Negative | 2731379 - 2731587 | 7432.77 |
| elongation factor g | D9I11_13450 | Not Available | Negative | 2731658 - 2733772 | 77585.8 |
| 30s ribosomal protein s7 | D9I11_13455 | Not Available | Negative | 2733869 - 2734339 | 17605.4 |
| 30s ribosomal protein s12 | D9I11_13460 | Not Available | Negative | 2734436 - 2734810 | 13737.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





