Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(18)-2'-o)-methyltransferase trmh | D9I11_12610 | Not Available | Positive | 2567650 - 2568339 | 25344.6 |
| atp-dependent dna helicase recg | D9I11_12615 | Not Available | Positive | 2568345 - 2570426 | 76512.2 |
| hypothetical protein | D9I11_12620 | Not Available | Negative | 2570411 - 2571277 | 33171.7 |
| sodium/glutamate symport carrier protein | D9I11_12625 | Not Available | Negative | 2571280 - 2572485 | 42445.9 |
| xanthine permease xanp | D9I11_12630 | Not Available | Positive | 2572765 - 2574156 | 48871.2 |
| asma family protein | D9I11_12635 | Not Available | Positive | 2574277 - 2575986 | 62301.1 |
| alpha-xylosidase | D9I11_12640 | Not Available | Negative | 2576039 - 2578357 | 88158.1 |
| inner membrane symporter yicj | D9I11_12645 | Not Available | Negative | 2578367 - 2579749 | 50951.4 |
| Trna-sec(p) | Not Available | Not Available | Positive | 2580042 - 2580132 | Not Available |
| duf4102 domain-containing protein | D9I11_12655 | Not Available | Positive | 2580435 - 2581625 | 45595.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





