Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1028 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1367777 bp
Thymine Count
1353527 bp
Guanine Count
1378718 bp
Cytosine Count
1392732 bp
Genome Length
5501070 bp
Protein-coding Genes
5023 genes
Non-Coding Genes
398 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase nfsa | D9I11_11400 | Not Available | Positive | 2309944 - 2310666 | 26730.2 |
| 30s ribosomal protein s6--l-glutamate ligase | D9I11_11405 | Not Available | Positive | 2310727 - 2311629 | 32394.5 |
| ybjn domain-containing protein | D9I11_11410 | Not Available | Positive | 2311717 - 2312193 | 17667.1 |
| putrescine-binding periplasmic protein | D9I11_11415 | Not Available | Positive | 2312545 - 2313657 | 40841.7 |
| putrescine abc transporter atp-binding subunit potg | D9I11_11420 | Not Available | Positive | 2313752 - 2314885 | 42135.6 |
| spermidine/putrescine abc transporter permease | D9I11_11425 | Not Available | Positive | 2314895 - 2315848 | 35491.6 |
| putrescine abc transporter permease poti | D9I11_11430 | Not Available | Positive | 2315845 - 2316690 | 30523.4 |
| duf2593 family protein | D9I11_11435 | Not Available | Positive | 2316750 - 2317238 | 18519.1 |
| 23s rrna (uracil(747)-c(5))-methyltransferase rlmc | D9I11_11440 | Not Available | Positive | 2317279 - 2318406 | 41981.1 |
| arginine/ornithine abc transporter substrate-binding protein | D9I11_11445 | Not Available | Negative | 2318581 - 2319312 | 26857.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





