Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| host specificity protein j | D9J11_27080 | Not Available | Positive | 5308777 - 5309124 | 12323.4 |
| flagellar hook-associated protein | D9J11_27085 | Not Available | Positive | 5309125 - 5309503 | 13678.1 |
| cadc family transcriptional regulator | D9J11_27090 | Not Available | Negative | 5309558 - 5310400 | 31206.6 |
| lateral flagellin lafa | D9J11_27095 | Not Available | Positive | 5310886 - 5311800 | 31670.6 |
| flagellar hook protein | D9J11_27105 | Not Available | Positive | 5312052 - 5313368 | 45913.3 |
| flagellar export chaperone flis | D9J11_27110 | Not Available | Positive | 5313391 - 5313783 | 14562.4 |
| flagellar protein flit | D9J11_27115 | Not Available | Positive | 5313788 - 5314033 | 9527.44 |
| flagellar hook-length control protein flik | D9J11_27120 | Not Available | Positive | 5314030 - 5315091 | 38690.1 |
| flagellar basal body protein flil | D9J11_27125 | Not Available | Positive | 5315099 - 5315566 | 17019.8 |
| flia/whig family rna polymerase sigma factor | D9J11_27130 | Not Available | Positive | 5315586 - 5316302 | 27522.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





