Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail sheath family protein | D9J11_26980 | Not Available | Negative | 5302430 - 5302842 | 15406.2 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | D9J11_26985 | Not Available | Positive | 5302843 - 5303130 | 10078.7 |
| hypothetical protein | D9J11_26990 | Not Available | Positive | 5303219 - 5303280 | 2509.16 |
| is4 family transposase | D9J11_26995 | Not Available | Positive | 5303281 - 5303711 | 16317.5 |
| type vi secretion system tip protein vgrg | D9J11_27000 | Not Available | Negative | 5303712 - 5304142 | 16999.7 |
| host specificity protein j | D9J11_27005 | Not Available | Positive | 5304143 - 5304567 | 16139.0 |
| phage tail protein | D9J11_27010 | Not Available | Negative | 5304568 - 5304663 | 3678.42 |
| phage tail protein | D9J11_27015 | Not Available | Negative | 5304660 - 5304980 | 12313.1 |
| is3 family transposase | D9J11_27020 | Not Available | Positive | 5304981 - 5305384 | 15456.3 |
| phage tail tape measure protein | D9J11_27025 | Not Available | Positive | 5305385 - 5305639 | 8708.36 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





