Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf932 domain-containing protein | D9J11_26785 | Not Available | Negative | 5282910 - 5283178 | 10858.0 |
| autotransporter domain-containing protein | D9J11_26790 | Not Available | Negative | 5283506 - 5283763 | 8900.27 |
| elongation factor tu | D9J11_26805 | Not Available | Positive | 5285408 - 5286204 | 29344.2 |
| phage terminase large subunit family protein | D9J11_26810 | Not Available | Positive | 5286205 - 5286981 | 29432.8 |
| his-xaa-ser system radical sam maturase hxsb | D9J11_26815 | Not Available | Positive | 5286982 - 5287132 | 5561.66 |
| radical sam protein | D9J11_26820 | Not Available | Positive | 5287125 - 5287757 | 23542.3 |
| is66 family transposase | D9J11_26830 | Not Available | Positive | 5288529 - 5289289 | 28102.6 |
| hypothetical protein | D9J11_26835 | Not Available | Negative | 5289290 - 5290004 | 23327.6 |
| hypothetical protein | D9J11_26840 | Not Available | Positive | 5290005 - 5290509 | 18626.0 |
| phage tail tape measure protein | D9J11_26850 | Not Available | Positive | 5290686 - 5291343 | 25215.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





