Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage tail tape measure protein | D9J11_26615 | Not Available | Negative | 5264318 - 5264572 | 8680.3 |
| is3 family transposase | D9J11_26620 | Not Available | Positive | 5264573 - 5265749 | 44812.4 |
| phage portal protein | D9J11_26625 | Not Available | Positive | 5265771 - 5266844 | 39881.2 |
| clp protease clpp | D9J11_26630 | Not Available | Positive | 5266789 - 5266967 | 6767.0 |
| recombinase family protein | D9J11_26635 | Not Available | Positive | 5267003 - 5267593 | 22078.8 |
| phage tail protein | D9J11_26640 | Not Available | Negative | 5267631 - 5268119 | 18409.0 |
| duf1983 domain-containing protein | D9J11_26645 | Not Available | Negative | 5268136 - 5269275 | 42106.3 |
| dna-binding protein | D9J11_26650 | Not Available | Positive | 5269276 - 5269822 | 20865.2 |
| hypothetical protein | D9J11_26655 | Not Available | Positive | 5269937 - 5270403 | 16493.7 |
| cobalt abc transporter permease | D9J11_26660 | Not Available | Positive | 5270619 - 5271508 | 33693.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





