Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is3 family transposase | D9J11_26360 | Not Available | Positive | 5237061 - 5237194 | 4933.92 |
| clp protease clpp | D9J11_26365 | Not Available | Positive | 5237195 - 5238678 | 53767.8 |
| duf2190 family protein | D9J11_26370 | Not Available | Positive | 5238766 - 5239089 | 11142.5 |
| dna breaking-rejoining protein | D9J11_26375 | Not Available | Positive | 5239082 - 5239239 | 5562.81 |
| replicative dna helicase | D9J11_26380 | Not Available | Positive | 5239240 - 5239470 | 8952.48 |
| hypothetical protein | D9J11_26385 | Not Available | Positive | 5239482 - 5239724 | 9308.45 |
| antitermination protein q | D9J11_26390 | Not Available | Positive | 5239721 - 5240086 | 13696.9 |
| nyn domain-containing protein | D9J11_26395 | Not Available | Negative | 5240099 - 5240962 | 33350.3 |
| ail/lom family protein | D9J11_26400 | Not Available | Negative | 5241262 - 5241861 | 21719.1 |
| duf1983 domain-containing protein | D9J11_26405 | Not Available | Negative | 5241932 - 5243176 | 45092.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





