Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein radc | D9J11_26305 | Not Available | Negative | 5229841 - 5230317 | 17690.4 |
| antirestriction protein | D9J11_26310 | Not Available | Negative | 5230333 - 5230818 | 18125.2 |
| is3 family transposase | D9J11_26315 | Not Available | Negative | 5230921 - 5231222 | 11538.6 |
| is66 family insertion sequence hypothetical protein | D9J11_26320 | Not Available | Positive | 5231260 - 5231514 | 8943.65 |
| is66 family insertion sequence hypothetical protein | D9J11_26325 | Not Available | Positive | 5231511 - 5231861 | 13187.1 |
| is66-like element isec23 family transposase | D9J11_26330 | Not Available | Positive | 5231892 - 5233054 | 44283.8 |
| autotransporter adhesin ag43 | D9J11_26335 | Not Available | Positive | 5233055 - 5235143 | 70039.6 |
| hypothetical protein | D9J11_26345 | Not Available | Negative | 5235299 - 5235529 | 8424.38 |
| hypothetical protein | D9J11_26350 | Not Available | Negative | 5235669 - 5236655 | 38670.6 |
| acp s-malonyltransferase | D9J11_26355 | Not Available | Negative | 5236652 - 5236975 | 12008.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





