Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21-like element isec12 family transposase | D9J11_26205 | Not Available | Positive | 5214543 - 5216084 | 59358.6 |
| atp-binding protein | D9J11_26210 | Not Available | Positive | 5216099 - 5216845 | 28348.2 |
| hypothetical protein | D9J11_26215 | Not Available | Positive | 5216897 - 5216995 | 3365.83 |
| toxin | D9J11_26220 | Not Available | Positive | 5217072 - 5217455 | 14273.1 |
| hypothetical protein | D9J11_26225 | Not Available | Positive | 5217452 - 5217940 | 18087.4 |
| duf957 domain-containing protein | D9J11_26230 | Not Available | Positive | 5217957 - 5218154 | 7462.77 |
| duf4942 domain-containing protein | D9J11_26235 | Not Available | Positive | 5218239 - 5219081 | 32477.9 |
| phage tail tape measure protein | D9J11_26240 | Not Available | Positive | 5219305 - 5221707 | 84580.6 |
| helix-turn-helix domain-containing protein | D9J11_26245 | Not Available | Positive | 5221767 - 5222693 | 33974.6 |
| aaa family atpase | D9J11_26250 | Not Available | Positive | 5222704 - 5223582 | 33296.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





