Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tail fiber assembly protein | D9J11_25985 | Not Available | Positive | 5177963 - 5178496 | 20664.4 |
| tail fiber assembly protein | D9J11_25990 | Not Available | Negative | 5178525 - 5179052 | 20171.7 |
| phage tail protein | D9J11_25995 | Not Available | Negative | 5179054 - 5179896 | 30415.4 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | D9J11_26000 | Not Available | Negative | 5180017 - 5181503 | 52777.0 |
| transcriptional regulator | D9J11_26005 | Not Available | Negative | 5181961 - 5182287 | 12576.2 |
| is66 family transposase | D9J11_26010 | Not Available | Negative | 5183057 - 5183485 | 15983.9 |
| restriction endonuclease subunit s | D9J11_26015 | Not Available | Positive | 5183486 - 5184167 | 26298.4 |
| hsdr family type i site-specific deoxyribonuclease | D9J11_26020 | Not Available | Positive | 5184289 - 5186902 | 100719.0 |
| transposase | D9J11_26025 | Not Available | Negative | 5186903 - 5187185 | 11161.3 |
| is200/is605 family transposase | D9J11_26030 | Not Available | Positive | 5187193 - 5187699 | 19499.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





