Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf945 family protein | D9J11_25930 | Not Available | Positive | 5171766 - 5172670 | 33129.4 |
| inovirus gp2 family protein | D9J11_25935 | Not Available | Positive | 5172671 - 5172967 | 11021.1 |
| hypothetical protein | D9J11_25940 | Not Available | Positive | 5173133 - 5173516 | 14930.5 |
| hypothetical protein | D9J11_25945 | Not Available | Positive | 5173513 - 5173938 | 15652.0 |
| hypothetical protein | D9J11_25955 | Not Available | Positive | 5174636 - 5174950 | 12005.5 |
| hypothetical protein | D9J11_25960 | Not Available | Positive | 5175082 - 5175615 | 19860.8 |
| proq/fino family protein | D9J11_25965 | Not Available | Negative | 5175617 - 5176111 | 18965.1 |
| transposase | D9J11_25970 | Not Available | Positive | 5176165 - 5176395 | 9237.11 |
| is3 family transposase | D9J11_25975 | Not Available | Negative | 5176398 - 5176538 | 5204.98 |
| phage tail protein | D9J11_25980 | Not Available | Positive | 5176659 - 5177960 | 46322.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





