Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhs repeat protein | D9J11_25685 | Not Available | Negative | 5133368 - 5136625 | 124618.0 |
| hypothetical protein | D9J11_25765 | Not Available | Positive | 5148139 - 5148328 | 6894.31 |
| hypothetical protein | D9J11_25770 | Not Available | Negative | 5148430 - 5148612 | 6951.48 |
| is3 family transposase | D9J11_25780 | Not Available | Negative | 5149369 - 5150901 | 59142.1 |
| hypothetical protein | D9J11_25795 | Not Available | Negative | 5153589 - 5153699 | 4180.12 |
| gtpase family protein | D9J11_25800 | Not Available | Negative | 5154071 - 5154943 | 32510.8 |
| duf3987 domain-containing protein | D9J11_25805 | Not Available | Positive | 5156123 - 5157628 | 56742.5 |
| hypothetical protein | D9J11_25810 | Not Available | Negative | 5157743 - 5158315 | 22254.3 |
| alpa family transcriptional regulator | D9J11_25815 | Not Available | Negative | 5158401 - 5158748 | 12904.6 |
| hypothetical protein | D9J11_25820 | Not Available | Positive | 5158853 - 5159341 | 17950.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





