Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain CVM N17EC1228 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1328414 bp
Thymine Count
1313561 bp
Guanine Count
1338976 bp
Cytosine Count
1354881 bp
Genome Length
5346416 bp
Protein-coding Genes
4828 genes
Non-Coding Genes
457 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | D9J11_25270 | Not Available | Negative | 5065263 - 5065860 | 22650.2 |
| restriction endonuclease subunit s | D9J11_25275 | Not Available | Negative | 5065861 - 5065972 | 4313.3 |
| type i restriction-modification system subunit m | D9J11_25280 | Not Available | Negative | 5065969 - 5067525 | 57896.2 |
| gtpase family protein | D9J11_25285 | Not Available | Positive | 5067789 - 5068661 | 32492.8 |
| dgtpase | D9J11_25290 | Not Available | Positive | 5068879 - 5071275 | 90191.0 |
| chemotaxis protein | D9J11_25295 | Not Available | Positive | 5071272 - 5072177 | 34015.1 |
| patatin-like phospholipase family protein | D9J11_25300 | Not Available | Positive | 5072174 - 5073244 | 38339.4 |
| hypothetical protein | D9J11_25305 | Not Available | Positive | 5073373 - 5073831 | 17102.4 |
| duf4339 domain-containing protein | D9J11_25310 | Not Available | Positive | 5073957 - 5074496 | 20633.2 |
| hypothetical protein | D9J11_25315 | Not Available | Positive | 5074766 - 5075179 | 14859.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





